/* ----------------------------------------------------------------------- Copyright: 2010-2021, imec Vision Lab, University of Antwerp 2014-2021, CWI, Amsterdam Contact: astra@astra-toolbox.com Website: http://www.astra-toolbox.com/ This file is part of the ASTRA Toolbox. The ASTRA Toolbox is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. The ASTRA Toolbox is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with the ASTRA Toolbox. If not, see . ----------------------------------------------------------------------- */ #include "astra/cuda/2d/em.h" #include "astra/cuda/2d/util.h" #include "astra/cuda/2d/arith.h" #include #include namespace astraCUDA { // TODO: ensure non-negativity somewhere?? EM::EM() { D_projData = 0; D_tmpData = 0; D_pixelWeight = 0; } EM::~EM() { reset(); } void EM::reset() { cudaFree(D_projData); cudaFree(D_tmpData); cudaFree(D_pixelWeight); D_projData = 0; D_tmpData = 0; D_pixelWeight = 0; ReconAlgo::reset(); } bool EM::init() { allocateVolumeData(D_pixelWeight, pixelPitch, dims); zeroVolumeData(D_pixelWeight, pixelPitch, dims); allocateVolumeData(D_tmpData, tmpPitch, dims); zeroVolumeData(D_tmpData, tmpPitch, dims); allocateProjectionData(D_projData, projPitch, dims); zeroProjectionData(D_projData, projPitch, dims); // We can't precompute pixelWeights when using a volume mask #if 0 if (!useVolumeMask) #endif precomputeWeights(); // TODO: check if allocations succeeded return true; } bool EM::precomputeWeights() { zeroVolumeData(D_pixelWeight, pixelPitch, dims); #if 0 if (useSinogramMask) { callBP(D_pixelWeight, pixelPitch, D_smaskData, smaskPitch); } else #endif { processSino(D_projData, 1.0f, projPitch, dims); callBP(D_pixelWeight, pixelPitch, D_projData, projPitch, 1.0f); } processVol(D_pixelWeight, pixelPitch, dims); #if 0 if (useVolumeMask) { // scale pixel weights with mask to zero out masked pixels processVol(D_pixelWeight, D_maskData, pixelPitch, dims); } #endif return true; } bool EM::iterate(unsigned int iterations) { #if 0 if (useVolumeMask) precomputeWeights(); #endif // iteration for (unsigned int iter = 0; iter < iterations && !astra::shouldAbort(); ++iter) { // Do FP of volumeData zeroProjectionData(D_projData, projPitch, dims); callFP(D_volumeData, volumePitch, D_projData, projPitch, 1.0f); // Divide sinogram by FP (into projData) processSino(D_projData, D_sinoData, projPitch, dims); // Do BP of projData into tmpData zeroVolumeData(D_tmpData, tmpPitch, dims); callBP(D_tmpData, tmpPitch, D_projData, projPitch, 1.0f); // Multiply volumeData with tmpData divided by pixel weights processVol(D_volumeData, D_tmpData, D_pixelWeight, pixelPitch, dims); } return true; } float EM::computeDiffNorm() { // copy sinogram to projection data duplicateProjectionData(D_projData, D_sinoData, sinoPitch, dims); // do FP, subtracting projection from sinogram if (useVolumeMask) { duplicateVolumeData(D_tmpData, D_volumeData, volumePitch, dims); processVol(D_tmpData, D_maskData, tmpPitch, dims); callFP(D_tmpData, tmpPitch, D_projData, projPitch, -1.0f); } else { callFP(D_volumeData, volumePitch, D_projData, projPitch, -1.0f); } // compute norm of D_projData float s = dotProduct2D(D_projData, projPitch, dims.iProjDets, dims.iProjAngles); return sqrt(s); } }