/* ----------------------------------------------------------------------- Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp 2014-2015, CWI, Amsterdam Contact: astra@uantwerpen.be Website: http://sf.net/projects/astra-toolbox This file is part of the ASTRA Toolbox. The ASTRA Toolbox is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. The ASTRA Toolbox is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with the ASTRA Toolbox. If not, see . ----------------------------------------------------------------------- $Id$ */ #include "astra/CudaFDKAlgorithm3D.h" #include "astra/AstraObjectManager.h" #include "astra/CudaProjector3D.h" #include "astra/ConeProjectionGeometry3D.h" #include "astra/CompositeGeometryManager.h" #include "astra/Logging.h" #include "../cuda/3d/astra3d.h" #include "../cuda/2d/fft.h" #include "../cuda/3d/util3d.h" using namespace std; using namespace astraCUDA3d; namespace astra { // type of the algorithm, needed to register with CAlgorithmFactory std::string CCudaFDKAlgorithm3D::type = "FDK_CUDA"; //---------------------------------------------------------------------------------------- // Constructor CCudaFDKAlgorithm3D::CCudaFDKAlgorithm3D() { m_bIsInitialized = false; m_iGPUIndex = -1; m_iVoxelSuperSampling = 1; } //---------------------------------------------------------------------------------------- // Constructor with initialization CCudaFDKAlgorithm3D::CCudaFDKAlgorithm3D(CProjector3D* _pProjector, CFloat32ProjectionData3DMemory* _pProjectionData, CFloat32VolumeData3DMemory* _pReconstruction) { _clear(); initialize(_pProjector, _pProjectionData, _pReconstruction); } //---------------------------------------------------------------------------------------- // Destructor CCudaFDKAlgorithm3D::~CCudaFDKAlgorithm3D() { CReconstructionAlgorithm3D::_clear(); } //--------------------------------------------------------------------------------------- // Check bool CCudaFDKAlgorithm3D::_check() { // check base class ASTRA_CONFIG_CHECK(CReconstructionAlgorithm3D::_check(), "CUDA_FDK", "Error in ReconstructionAlgorithm3D initialization"); const CProjectionGeometry3D* projgeom = m_pSinogram->getGeometry(); ASTRA_CONFIG_CHECK(dynamic_cast(projgeom), "CUDA_FDK", "Error setting FDK geometry"); const CVolumeGeometry3D* volgeom = m_pReconstruction->getGeometry(); bool cube = true; if (abs(volgeom->getPixelLengthX() / volgeom->getPixelLengthY() - 1.0) > 0.00001) cube = false; if (abs(volgeom->getPixelLengthX() / volgeom->getPixelLengthZ() - 1.0) > 0.00001) cube = false; ASTRA_CONFIG_CHECK(cube, "CUDA_FDK", "Voxels must be cubes for FDK"); return true; } //--------------------------------------------------------------------------------------- void CCudaFDKAlgorithm3D::initializeFromProjector() { m_iVoxelSuperSampling = 1; m_iGPUIndex = -1; CCudaProjector3D* pCudaProjector = dynamic_cast(m_pProjector); if (!pCudaProjector) { if (m_pProjector) { ASTRA_WARN("non-CUDA Projector3D passed to FDK_CUDA"); } } else { m_iVoxelSuperSampling = pCudaProjector->getVoxelSuperSampling(); m_iGPUIndex = pCudaProjector->getGPUIndex(); } } //--------------------------------------------------------------------------------------- // Initialize - Config bool CCudaFDKAlgorithm3D::initialize(const Config& _cfg) { ASTRA_ASSERT(_cfg.self); ConfigStackCheck CC("CudaFDKAlgorithm3D", this, _cfg); // if already initialized, clear first if (m_bIsInitialized) { clear(); } // initialization of parent class if (!CReconstructionAlgorithm3D::initialize(_cfg)) { return false; } initializeFromProjector(); // Deprecated options m_iVoxelSuperSampling = (int)_cfg.self.getOptionNumerical("VoxelSuperSampling", m_iVoxelSuperSampling); m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUindex", m_iGPUIndex); m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUIndex", m_iGPUIndex); CC.markOptionParsed("VoxelSuperSampling"); CC.markOptionParsed("GPUIndex"); if (!_cfg.self.hasOption("GPUIndex")) CC.markOptionParsed("GPUindex"); // filter if (_cfg.self.hasOption("FilterSinogramId")){ m_iFilterDataId = (int)_cfg.self.getOptionInt("FilterSinogramId"); const CFloat32ProjectionData2D * pFilterData = dynamic_cast(CData2DManager::getSingleton().get(m_iFilterDataId)); if (!pFilterData){ ASTRA_ERROR("Incorrect FilterSinogramId"); return false; } const CProjectionGeometry3D* projgeom = m_pSinogram->getGeometry(); const CProjectionGeometry2D* filtgeom = pFilterData->getGeometry(); int iPaddedDetCount = calcNextPowerOfTwo(2 * projgeom->getDetectorColCount()); int iHalfFFTSize = calcFFTFourSize(iPaddedDetCount); if(filtgeom->getDetectorCount()!=iHalfFFTSize || filtgeom->getProjectionAngleCount()!=projgeom->getProjectionCount()){ ASTRA_ERROR("Filter size does not match required size (%i angles, %i detectors)",projgeom->getProjectionCount(),iHalfFFTSize); return false; } }else { m_iFilterDataId = -1; } CC.markOptionParsed("FilterSinogramId"); m_bShortScan = _cfg.self.getOptionBool("ShortScan", false); CC.markOptionParsed("ShortScan"); // success m_bIsInitialized = _check(); return m_bIsInitialized; } //---------------------------------------------------------------------------------------- // Initialize - C++ bool CCudaFDKAlgorithm3D::initialize(CProjector3D* _pProjector, CFloat32ProjectionData3DMemory* _pSinogram, CFloat32VolumeData3DMemory* _pReconstruction) { // if already initialized, clear first if (m_bIsInitialized) { clear(); } // required classes m_pProjector = _pProjector; m_pSinogram = _pSinogram; m_pReconstruction = _pReconstruction; // success m_bIsInitialized = _check(); return m_bIsInitialized; } //--------------------------------------------------------------------------------------- // Information - All map CCudaFDKAlgorithm3D::getInformation() { map res; return mergeMap(CAlgorithm::getInformation(), res); }; //--------------------------------------------------------------------------------------- // Information - Specific boost::any CCudaFDKAlgorithm3D::getInformation(std::string _sIdentifier) { return CAlgorithm::getInformation(_sIdentifier); }; //---------------------------------------------------------------------------------------- // Iterate void CCudaFDKAlgorithm3D::run(int _iNrIterations) { // check initialized ASTRA_ASSERT(m_bIsInitialized); const CProjectionGeometry3D* projgeom = m_pSinogram->getGeometry(); const CConeProjectionGeometry3D* conegeom = dynamic_cast(projgeom); const CVolumeGeometry3D& volgeom = *m_pReconstruction->getGeometry(); ASTRA_ASSERT(conegeom); CFloat32ProjectionData3DMemory* pSinoMem = dynamic_cast(m_pSinogram); ASTRA_ASSERT(pSinoMem); CFloat32VolumeData3DMemory* pReconMem = dynamic_cast(m_pReconstruction); ASTRA_ASSERT(pReconMem); const float *filter = NULL; if (m_iFilterDataId != -1) { const CFloat32ProjectionData2D *pFilterData = dynamic_cast(CData2DManager::getSingleton().get(m_iFilterDataId)); if (pFilterData) filter = pFilterData->getDataConst(); } #if 0 bool ok = true; ok = astraCudaFDK(pReconMem->getData(), pSinoMem->getDataConst(), &volgeom, conegeom, m_bShortScan, m_iGPUIndex, m_iVoxelSuperSampling, filter); ASTRA_ASSERT(ok); #endif CCompositeGeometryManager cgm; cgm.doFDK(m_pProjector, pReconMem, pSinoMem, m_bShortScan, filter); } //---------------------------------------------------------------------------------------- } // namespace astra