1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
|
/*
-----------------------------------------------------------------------
Copyright: 2010-2014, iMinds-Vision Lab, University of Antwerp
2014, CWI, Amsterdam
Contact: astra@uantwerpen.be
Website: http://sf.net/projects/astra-toolbox
This file is part of the ASTRA Toolbox.
The ASTRA Toolbox is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
The ASTRA Toolbox is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>.
-----------------------------------------------------------------------
$Id$
*/
#ifndef _INC_ASTRA_VOLUMEGEOMETRY2D
#define _INC_ASTRA_VOLUMEGEOMETRY2D
#include "Globals.h"
#include "Config.h"
namespace astra
{
/**
* This class represents a pixel grid that is placed in the geometry. It defines a rectangular volume window.
*
* \par XML Configuration
* \astra_xml_item{GridColCount, integer, Number of columns in this geometry.}
* \astra_xml_item{GridRowCount, integer, Number of rows in this geometry.}
* \astra_xml_item_option{WindowMinX, float, Minimal X-coordinate in the volume window.}
* \astra_xml_item_option{WindowMaxX, float, Maximal X-coordinate in the volume window.}
* \astra_xml_item_option{WindowMinY, float, Minimal Y-coordinate in the volume window.}
* \astra_xml_item_option{WindowMaxY, float, Maximal Y-coordinate in the volume window.}
*
* \par MATLAB example
* \astra_code{
* vol_geom = struct();\n
* vol_geom.GridColCount = 1024;\n
* vol_geom.GridRowCount = 768;\n
* vol_geom.option.WindowMinX = -512;\n
* vol_geom.option.WindowMaxX = -384;\n
* vol_geom.option.WindowMinY = 512;\n
* vol_geom.option.WindowMaxY = 384;\n
* }
*/
class _AstraExport CVolumeGeometry2D {
protected:
bool m_bInitialized; ///< Has this object been initialized?
int m_iGridColCount; ///< number of columns in the volume grid.
int m_iGridRowCount; ///< number of rows in the volume grid.
int m_iGridTotCount; ///< total number of pixels in the volume grid (= m_iGridColCount * m_iGridRowCount).
/** Width of the volume window, in unit lengths.
*
* Note that this width is independent of the number of pixels in the X-direction, as the width of a pixel can
* be different from 1.
*/
float32 m_fWindowLengthX;
/** Height of the volume window, in unit lengths.
*
* Note that this height is independent of the number of pixels in the Y-direction, as the height of a pixel can
* be different from 1.
*/
float32 m_fWindowLengthY;
float32 m_fWindowArea; ///< Total area of the volume window, in unit lengths squared.
float32 m_fPixelLengthX; ///< Width of a single pixel, in unit lengths.
float32 m_fPixelLengthY; ///< Height of a single pixel, in unit lengths.
float32 m_fPixelArea; ///< Area of a single pixel, in unit lengths squared.
float32 m_fDivPixelLengthX; ///< 1/m_fPixelLengthX, used for fast division.
float32 m_fDivPixelLengthY; ///< 1/m_fPixelLengthY, used for fast division.
float32 m_fWindowMinX; ///< Minimal X-coordinate in the volume window.
float32 m_fWindowMinY; ///< Maximal X-coordinate in the volume window.
float32 m_fWindowMaxX; ///< Minimal Y-coordinate in the volume window.
float32 m_fWindowMaxY; ///< Maximal Y-coordinate in the volume window.
/** Check the values of this object. If everything is ok, the object can be set to the initialized state.
* The following statements are then guaranteed to hold:
* - number of rows and columns is larger than zero
* - window minima is smaller than window maxima
* - m_iGridTotCount, m_fWindowLengthX, m_fWindowLengthY, m_fWindowArea, m_fPixelLengthX,
* m_fPixelLengthY, m_fPixelArea, m_fDivPixelLengthX and m_fDivPixelLengthY are initialized ok
*/
bool _check();
/** Calculate values of all member variables from m_iGridRow/ColCount, m_fWindow*
*/
void _calculateDependents();
public:
/** Default constructor. Sets all numeric member variables to 0 and all pointer member variables to NULL.
*
* If an object is constructed using this default constructor, it must always be followed by a call
* to one of the init() methods before the object can be used. Any use before calling init() is not allowed,
* except calling the member function isInitialized().
*/
CVolumeGeometry2D();
/** Constructor. Create an instance of the CVolumeGeometry2D class.
* The minimal and coordinates values of the geometry will be set to -/+ the number of rows/columns.
*
* @param _iGridCountX Number of columns in the volume grid.
* @param _iGridCountY Number of rows in the volume grid.
*/
CVolumeGeometry2D(int _iGridCountX,
int _iGridCountY);
/** Constructor. Create an instance of the CVolumeGeometry2D class.
*
* @param _iGridCountX Number of columns in the volume grid.
* @param _iGridCountY Number of rows in the volume grid.
* @param _fWindowMinX Minimal X-coordinate in the volume window.
* @param _fWindowMinY Minimal Y-coordinate in the volume window.
* @param _fWindowMaxX Maximal X-coordinate in the volume window.
* @param _fWindowMaxY Maximal Y-coordinate in the volume window.
*/
CVolumeGeometry2D(int _iGridCountX,
int _iGridCountY,
float32 _fWindowMinX,
float32 _fWindowMinY,
float32 _fWindowMaxX,
float32 _fWindowMaxY);
/** Destructor.
*/
virtual ~CVolumeGeometry2D();
/** Clear all member variables, setting all numeric variables to 0 and all pointers to NULL.
*/
void clear();
/** Create a hard copy.
*/
CVolumeGeometry2D* clone();
/** Initialize the volume geometry with a config object.
*
* @param _cfg Configuration Object.
* @return initialization successful?
*/
virtual bool initialize(const Config& _cfg);
/** Initialization. Initializes an instance of the CVolumeGeometry2D class.
* The minimal and maximal coordinates of the geometry will be set to -/+ half the number of rows/columns.
*
* If the object has been initialized before, the object is reinitialized and
* memory is freed and reallocated if necessary.
*
* @param _iGridColCount Number of columns in the volume grid.
* @param _iGridRowCount Number of rows in the volume grid.
* @return initialization successful
*/
bool initialize(int _iGridColCount, int _iGridRowCount);
/** Initialization. Initializes an instance of the CVolumeGeometry2D class.
*
* If the object has been initialized before, the object is reinitialized and
* memory is freed and reallocated if necessary.
*
* @param _iGridColCount Number of columns in the volume grid.
* @param _iGridRowCount Number of rows in the volume grid.
* @param _fWindowMinX Minimal X-coordinate in the volume window.
* @param _fWindowMinY Minimal Y-coordinate in the volume window.
* @param _fWindowMaxX Maximal X-coordinate in the volume window.
* @param _fWindowMaxY Maximal Y-coordinate in the volume window.
* @return initialization successful
*/
bool initialize(int _iGridColCount,
int _iGridRowCount,
float32 _fWindowMinX,
float32 _fWindowMinY,
float32 _fWindowMaxX,
float32 _fWindowMaxY);
/** Get the initialization state of the object.
*
* @return true iff the object has been initialized.
*/
bool isInitialized() const;
/** Return true if this geometry instance is the same as the one specified.
*
* @return true if this geometry instance is the same as the one specified.
*/
virtual bool isEqual(CVolumeGeometry2D*) const;
/** Get the number of columns in the volume grid.
*
* @return Number of columns in the volume grid.
*/
int getGridColCount() const;
/** Get the number of rows in the volume grid.
*
* @return Number of rows in the volume grid.
*/
int getGridRowCount() const;
/** Get the total number of pixels in the volume grid.
*
* @return Total number of pixels.
*/
int getGridTotCount() const;
/** Get the horizontal length of the volume window, in unit lengths.
*
* @return Horizontal length of the volume window.
*/
float32 getWindowLengthX() const;
/** Get the vertical length of the volume window, in unit lengths.
*
* @return Vertical length of the volume window.
*/
float32 getWindowLengthY() const;
/** Get the total area of the volume window, in unit lengths squared.
*
* @return Total area of the volume window.
*/
float32 getWindowArea() const;
/** Get the horizontal length of a single pixel (i.e., width), in unit lengths.
*
* @return Horizontal length of a single pixel.
*/
float32 getPixelLengthX() const;
/** Get the vertical length of a single pixel (i.e., height), in unit lengths.
*
* @return Vertical length of a single pixel.
*/
float32 getPixelLengthY() const;
/** Get the area of a single pixel (width*height), in unit lengths squared.
*
* @return Area of a single pixel.
*/
float32 getPixelArea() const;
/** Get the minimal X-coordinate in the volume window.
*
* @return Minimal X-coordinate in the volume window.
*/
float32 getWindowMinX() const;
/** Get the minimal Y-coordinate in the volume window.
*
* @return Minimal Y-coordinate in the volume window.
*/
float32 getWindowMinY() const;
/** Get the maximal X-coordinate in the volume window.
*
* @return Maximal X-coordinate in the volume window.
*/
float32 getWindowMaxX() const;
/** Get the maximal Y-coordinate in the volume window.
*
* @return Maximal Y-coordinate in the volume window.
*/
float32 getWindowMaxY() const;
/** Convert column and row index of a pixel to a single index in the interval [0..getGridTotCount()-1].
*
* @param _iPixelCol Column index of the pixel, in the interval [0..getGridColCount()-1].
* @param _iPixelRow Row index of the pixel, in the interval [0..getGridRowCount()-1].
* @return Computed index of the pixel, in the interval [0..getGridTotCount()-1].
*/
int pixelRowColToIndex(int _iPixelRow, int _iPixelCol) const;
/** Convert a pixel index (from the interval [0..getGridTotCount()-1] to a column and row index.
*
* @param _iPixelIndex Index of the pixel, in the interval [0..getGridTotCount()-1].
* @param _iPixelRow Computed row index of the pixel, in the interval [0..getGridRowCount()-1].
* @param _iPixelCol Computed column index of the pixel, in the interval [0..getGridColCount()-1].
*/
void pixelIndexToRowCol(int _iPixelIndex, int &_iPixelRow, int &_iPixelCol) const;
/** Convert a pixel column index to the X-coordinate of its center.
*
* @param _iPixelCol Column index of the pixel.
* @return X-coordinate of the pixel center.
*/
float32 pixelColToCenterX(int _iPixelCol) const;
/** Convert a pixel column index to the minimum X-coordinate of points in that column.
*
* @param _iPixelCol Column index of the pixel.
* @return Minimum X-coordinate.
*/
float32 pixelColToMinX(int _iPixelCol) const;
/** Convert a pixel column index to the maximum X-coordinate of points in that column.
*
* @param _iPixelCol Column index of the pixel.
* @return Maximum X-coordinate.
*/
float32 pixelColToMaxX(int _iPixelCol) const;
/** Convert a pixel row index to the Y-coordinate of its center.
*
* @param _iPixelRow Row index of the pixel.
* @return Y-coordinate of the pixel center.
*/
float32 pixelRowToCenterY(int _iPixelRow) const;
/** Convert a pixel row index to the minimum Y-coordinate of points in that row.
*
* @param _iPixelRow Row index of the pixel.
* @return Minimum Y-coordinate.
*/
float32 pixelRowToMinY(int _iPixelRow) const;
/** Convert a pixel row index to the maximum Y-coordinate of points in that row.
*
* @param _iPixelRow Row index of the pixel.
* @return Maximum Y-coordinate.
*/
float32 pixelRowToMaxY(int _iPixelRow) const;
/** Convert an X-coordinate to a column index in the volume grid.
*
* @param _fCoordX X-coordinate.
* @return If the X-coordinate falls within a column of the volume grid, the column index is returned.
* Otherwise, a value of -1 is returned.
*/
int coordXToCol(float32 _fCoordX) const;
/** Convert a Y-coordinate to a row index in the volume grid.
*
* @param _fCoordY Y-coordinate
* @return If the Y-coordinate falls within a row of the volume grid, the row index is returned.
* Otherwise, a value of -1 is returned.
*/
int coordYToRow(float32 _fCoordY) const;
/** Convert an X-coordinate to an offset in the volume grid.
* WindowMinX is converted to 0.
*
* @param _fCoordX X-coordinate.
* @return The corresponding offset in the volume grid
*/
float coordXToColF(float32 _fCoordX) const;
/** Convert a Y-coordinate to an offset in the volume grid.
* WindowMaxY is converted to 0.
*
* @param _fCoordY Y-coordinate
* @return The corresponding offset in the volume grid
*/
float coordYToRowF(float32 _fCoordY) const;
//< For Config unused argument checking
ConfigCheckData* configCheckData;
friend class ConfigStackCheck<CVolumeGeometry2D>;
};
// Get the initialization state of the object.
inline bool CVolumeGeometry2D::isInitialized() const
{
return m_bInitialized;
}
// Get the number of columns in the volume grid.
inline int CVolumeGeometry2D::getGridColCount() const
{
ASTRA_ASSERT(m_bInitialized);
return m_iGridColCount;
}
// Get the number of rows in the volume grid.
inline int CVolumeGeometry2D::getGridRowCount() const
{
ASTRA_ASSERT(m_bInitialized);
return m_iGridRowCount;
}
// Get the total number of pixels in the volume window.
inline int CVolumeGeometry2D::getGridTotCount() const
{
ASTRA_ASSERT(m_bInitialized);
return m_iGridTotCount;
}
// Get the horizontal length of the volume window, in unit lengths.
inline float32 CVolumeGeometry2D::getWindowLengthX() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowLengthX;
}
// Get the vertical length of the volume window, in unit lengths.
inline float32 CVolumeGeometry2D::getWindowLengthY() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowLengthY;
}
// Get the total area of the volume window, in unit lengths squared.
inline float32 CVolumeGeometry2D::getWindowArea() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowArea;
}
// Get the horizontal length of a single pixel (i.e., width), in unit lengths.
inline float32 CVolumeGeometry2D::getPixelLengthX() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fPixelLengthX;
}
// Get the vertical length of a single pixel (i.e., height), in unit lengths.
inline float32 CVolumeGeometry2D::getPixelLengthY() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fPixelLengthY;
}
// Get the area of a single pixel (width*height), in unit lengths squared.
inline float32 CVolumeGeometry2D::getPixelArea() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fPixelArea;
}
// Get the minimal X-coordinate in the volume window.
inline float32 CVolumeGeometry2D::getWindowMinX() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowMinX;
}
// Get the minimal Y-coordinate in the volume window.
inline float32 CVolumeGeometry2D::getWindowMinY() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowMinY;
}
// Get the maximal X-coordinate in the volume window.
inline float32 CVolumeGeometry2D::getWindowMaxX() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowMaxX;
}
// Get the maximal Y-coordinate in the volume window.
inline float32 CVolumeGeometry2D::getWindowMaxY() const
{
ASTRA_ASSERT(m_bInitialized);
return m_fWindowMaxY;
}
// Convert column and row index of a pixel to a single index in the interval [0..getGridCountTot()-1].
inline int CVolumeGeometry2D::pixelRowColToIndex(int _iPixelRow, int _iPixelCol) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelCol >= 0);
ASTRA_ASSERT(_iPixelCol < m_iGridColCount);
ASTRA_ASSERT(_iPixelRow >= 0);
ASTRA_ASSERT(_iPixelRow < m_iGridRowCount);
return (_iPixelRow * m_iGridColCount + _iPixelCol);
}
// Convert a pixel index (from the interval [0..getGridCountTot()-1] to a column and row index.
inline void CVolumeGeometry2D::pixelIndexToRowCol(int _iPixelIndex, int &_iPixelRow, int &_iPixelCol) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelIndex >= 0);
ASTRA_ASSERT(_iPixelIndex < m_iGridTotCount);
_iPixelCol = (_iPixelIndex % m_iGridColCount);
_iPixelRow = (_iPixelIndex / m_iGridColCount);
}
// Convert a pixel column index to the X-coordinate of its center
inline float32 CVolumeGeometry2D::pixelColToCenterX(int _iPixelCol) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelCol >= 0);
ASTRA_ASSERT(_iPixelCol < m_iGridColCount);
return (m_fWindowMinX + (float32(_iPixelCol) + 0.5f) * m_fPixelLengthX);
}
// Convert a pixel column index to the minimum X-coordinate of points in that column
inline float32 CVolumeGeometry2D::pixelColToMinX(int _iPixelCol) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelCol >= 0);
ASTRA_ASSERT(_iPixelCol < m_iGridColCount);
return (m_fWindowMinX + float32(_iPixelCol) * m_fPixelLengthX);
}
// Convert a pixel column index to the maximum X-coordinate of points in that column
inline float32 CVolumeGeometry2D::pixelColToMaxX(int _iPixelCol) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelCol >= 0);
ASTRA_ASSERT(_iPixelCol < m_iGridColCount);
return (m_fWindowMinX + (float32(_iPixelCol) + 1.0f) * m_fPixelLengthX);
}
// Convert a pixel row index to the Y-coordinate of its center
inline float32 CVolumeGeometry2D::pixelRowToCenterY(int _iPixelRow) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelRow >= 0);
ASTRA_ASSERT(_iPixelRow < m_iGridRowCount);
return (m_fWindowMaxY - (float32(_iPixelRow) + 0.5f) * m_fPixelLengthY);
}
// Convert a pixel row index to the minimum Y-coordinate of points in that row
inline float32 CVolumeGeometry2D::pixelRowToMinY(int _iPixelRow) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelRow >= 0);
ASTRA_ASSERT(_iPixelRow < m_iGridRowCount);
return (m_fWindowMaxY - (float32(_iPixelRow) + 1.0f) * m_fPixelLengthY);
}
// Convert a pixel row index to the maximum Y-coordinate of points in that row
inline float32 CVolumeGeometry2D::pixelRowToMaxY(int _iPixelRow) const
{
ASTRA_ASSERT(m_bInitialized);
ASTRA_ASSERT(_iPixelRow >= 0);
ASTRA_ASSERT(_iPixelRow < m_iGridRowCount);
return (m_fWindowMaxY - (float32(_iPixelRow) * m_fPixelLengthY));
}
// Convert an X-coordinate to a column index in the volume grid
inline int CVolumeGeometry2D::coordXToCol(float32 _fCoordX) const
{
if (_fCoordX < m_fWindowMinX) return -1;
if (_fCoordX > m_fWindowMaxX) return -1;
int iCol = int((_fCoordX - m_fWindowMinX) * m_fDivPixelLengthX);
ASTRA_ASSERT(iCol >= 0);
ASTRA_ASSERT(iCol < m_iGridColCount);
return iCol;
}
// Convert a Y-coordinate to a row index in the volume grid
inline int CVolumeGeometry2D::coordYToRow(float32 _fCoordY) const
{
if (_fCoordY < m_fWindowMinY) return -1;
if (_fCoordY > m_fWindowMaxY) return -1;
int iRow = int((m_fWindowMaxY - _fCoordY) * m_fDivPixelLengthY);
ASTRA_ASSERT(iRow >= 0);
ASTRA_ASSERT(iRow < m_iGridRowCount);
return iRow;
}
// Convert an X-coordinate to an offset in the volume grid
// (WindowMinX is converted to 0)
inline float CVolumeGeometry2D::coordXToColF(float32 _fCoordX) const
{
return (_fCoordX - m_fWindowMinX) * m_fDivPixelLengthX;
}
// Convert a Y-coordinate to an offset in the volume grid
// (WindowMaxY is converted to 0)
inline float CVolumeGeometry2D::coordYToRowF(float32 _fCoordY) const
{
return (m_fWindowMaxY - _fCoordY) * m_fDivPixelLengthY;
}
} // end namespace astra
#endif /* _INC_ASTRA_VOLUMEGEOMETRY2D */
|