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authorWillem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl>2016-07-28 17:05:24 +0200
committerWillem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl>2016-07-28 17:05:24 +0200
commitb2611a03577c285ddf48edab0d05dafa09ab362c (patch)
treec1d2f1b5166ba23f55e68e8faf0832f7c540f787 /samples/matlab
parent1ff4a270a7df1edb54dd91fe653d6a936b959b3a (diff)
parent53249b3ad63f0d08b9862a75602acf263d230d77 (diff)
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Merge branch 'master' into parvec
Diffstat (limited to 'samples/matlab')
-rw-r--r--samples/matlab/s010_supersampling.m28
-rw-r--r--samples/matlab/s020_3d_multiGPU.m38
2 files changed, 48 insertions, 18 deletions
diff --git a/samples/matlab/s010_supersampling.m b/samples/matlab/s010_supersampling.m
index 80f6f56..148f6ad 100644
--- a/samples/matlab/s010_supersampling.m
+++ b/samples/matlab/s010_supersampling.m
@@ -12,23 +12,15 @@ vol_geom = astra_create_vol_geom(256, 256);
proj_geom = astra_create_proj_geom('parallel', 3.0, 128, linspace2(0,pi,180));
P = phantom(256);
-% Because the astra_create_sino_gpu wrapper does not have support for
-% all possible algorithm options, we manually create a sinogram
-phantom_id = astra_mex_data2d('create', '-vol', vol_geom, P);
-sinogram_id = astra_mex_data2d('create', '-sino', proj_geom);
-cfg = astra_struct('FP_CUDA');
-cfg.VolumeDataId = phantom_id;
-cfg.ProjectionDataId = sinogram_id;
+% We create a projector set up to use 3 rays per detector element
+cfg_proj = astra_struct('cuda');
+cfg_proj.option.DetectorSuperSampling = 3;
+cfg_proj.ProjectionGeometry = proj_geom;
+cfg_proj.VolumeGeometry = vol_geom;
+proj_id = astra_mex_projector('create', cfg_proj);
-% Set up 3 rays per detector element
-cfg.option.DetectorSuperSampling = 3;
-alg_id = astra_mex_algorithm('create', cfg);
-astra_mex_algorithm('run', alg_id);
-astra_mex_algorithm('delete', alg_id);
-astra_mex_data2d('delete', phantom_id);
-
-sinogram3 = astra_mex_data2d('get', sinogram_id);
+[sinogram3 sinogram_id] = astra_create_sino(P, proj_id);
figure(1); imshow(P, []);
figure(2); imshow(sinogram3, []);
@@ -39,14 +31,14 @@ rec_id = astra_mex_data2d('create', '-vol', vol_geom);
cfg = astra_struct('SIRT_CUDA');
cfg.ReconstructionDataId = rec_id;
cfg.ProjectionDataId = sinogram_id;
-% Set up 3 rays per detector element
-cfg.option.DetectorSuperSampling = 3;
+cfg.ProjectorId = proj_id;
+
% There is also an option for supersampling during the backprojection step.
% This should be used if your detector pixels are smaller than the voxels.
% Set up 2 rays per image pixel dimension, for 4 rays total per image pixel.
-% cfg.option.PixelSuperSampling = 2;
+% cfg_proj.option.PixelSuperSampling = 2;
alg_id = astra_mex_algorithm('create', cfg);
diff --git a/samples/matlab/s020_3d_multiGPU.m b/samples/matlab/s020_3d_multiGPU.m
new file mode 100644
index 0000000..bade325
--- /dev/null
+++ b/samples/matlab/s020_3d_multiGPU.m
@@ -0,0 +1,38 @@
+% -----------------------------------------------------------------------
+% This file is part of the ASTRA Toolbox
+%
+% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp
+% 2014-2015, CWI, Amsterdam
+% License: Open Source under GPLv3
+% Contact: astra@uantwerpen.be
+% Website: http://sf.net/projects/astra-toolbox
+% -----------------------------------------------------------------------
+
+
+% Set up multi-GPU usage.
+% This only works for 3D GPU forward projection and back projection.
+astra_mex('set_gpu_index', [0 1]);
+
+% Optionally, you can also restrict the amount of GPU memory ASTRA will use.
+% The line commented below sets this to 1GB.
+%astra_mex('set_gpu_index', [0 1], 'memory', 1024*1024*1024);
+
+vol_geom = astra_create_vol_geom(1024, 1024, 1024);
+
+angles = linspace2(0, pi, 1024);
+proj_geom = astra_create_proj_geom('parallel3d', 1.0, 1.0, 1024, 1024, angles);
+
+% Create a simple hollow cube phantom
+cube = zeros(1024,1024,1024);
+cube(129:896,129:896,129:896) = 1;
+cube(257:768,257:768,257:768) = 0;
+
+% Create projection data from this
+[proj_id, proj_data] = astra_create_sino3d_cuda(cube, proj_geom, vol_geom);
+
+% Backproject projection data
+[bproj_id, bproj_data] = astra_create_backprojection3d_cuda(proj_data, proj_geom, vol_geom);
+
+astra_mex_data3d('delete', proj_id);
+astra_mex_data3d('delete', bproj_id);
+